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Life science organizations are increasingly using hackathons to bring communities together to tackle shared problems, teach skills, and develop new resources. In this study, we explored the potential benefits of hackathons for the biotechnology workforce education community by organizing two hackathons centered around developing research projects in antibody engineering—a practice widely employed in the biotechnology industry but uncommon in biotechnology education. To integrate antibody engineering into courses, instructors need protocols for both computational and laboratory methods. Developing and testing these protocols provides rich opportunities for undergraduate research, allowing students to learn industry-relevant skills and contribute to creating materials for the community. During the hackathons, teams of faculty, students, and industry partners collaborated to generate several new research projects. Each hackathon was only a few days, yet student participants reported benefits similar to those attributed to traditional undergraduate research experiences. We share lessons learned from these hackathons and provide insights for the workforce education community for hosting similar events. 

The end-Cretaceous mass extinction triggered the collapse of ecosystems and a drastic turnover in mammalian communities leading to the demise of many ecologically specialized species. While Mesozoic mammals were ecomorphologically diverse, recognizable ecological richness was only truly established in the Eocene. Questions remain about the ecology of the first wave of mammals radiating after the extinction. Here, we use the semicircular canals of the inner ear as a proxy for locomotor behavior. Thirty new inner ear virtual endocasts were generated using high-resolution computed tomography scanning. This sample was supplemented by data from the literature to construct a dataset of 79 fossils spanning the Jurassic to the Eocene alongside 262 extant mammals. Vestibular sensitivity was measured using the radius of curvature against body mass and the residuals of this relationship were analyzed. The petrosal lobule size relative to body mass were compared with the inner ear data as they have a role in maintaining gaze stabilization during motion. Paleocene mammals exhibited smaller canal radius of curvature, compared to Mesozoic, Eocene, and extant taxa. In the early Paleocene, canal radius and associated petrosal lobules were relatively smaller on average compared to other temporal groups, suggesting less ability for fast movements. 

The end-Cretaceous extinction triggered the collapse of ecosystems and a drastic turnover of mammalian communities. During the Mesozoic, mammals were ecologically diverse, but less so than extant species. Modern ecological richness was established by the Eocene, but questions remain about the ecology of the first wave of mammals radiating after the extinction.Postcranial fossils are often used to determine locomotor behavior; however, the semicircular canals of theinner ear also represent a reliable proxy. These canals detect the angular acceleration of the head duringl ocomotion and transmit neuronal signals to the brain to allow stabilization of the eyes and head. Accordingly, vestibular sensitivity to rapid rotational head movements is higher in species with a larger canal radius of curvature and more orthogonal canals. We used high-resolution computed tomography scanning to obtain inner ear virtual endocasts for 30 specimens. We supplemented these with data from the literature to constructa database of 79 fossil from the Jurassic to the Eocene and 262 extant mammals. We compared data on canal morphology and another lifestyle proxy, the size of the petrosal lobules, which have a role in maintaining eyes’ movements and position. We find that Paleocene mammals exhibited a lower average and more constricted range of Agility Indices (AI), a new measure of canal radius size relative to body size, compared to Mesozoic, Eocene and extant taxa. Inthe early Paleocene, body mass and canal radius increased, but the former outpaced the latter leading to an AIdecline. Similarly, their petrosal lobules were relatively smaller on average compared to other temporal groups, which suggests less ability for fast movements. Additionally, Paleocene mammals had similar AIs to extant scansorial and terrestrial quadrupeds. In contrast, the lack of canal orthogonality change from the Mesozoic to the Paleocene indicates no trend toward lower vestibular sensitivity regardless of changes in body size. This result may reflect functional differences between canal orthogonality and radius size. Our results support previous work on tarsal morphology and locomotor behavior ancestral state reconstruction suggesting that ground dwelling mammals were more common than arboreal taxa during the Paleocene. Ultimately, this pattern may indicate that the collapse of forested environments immediately after extinction led to the preferential survivorship of more terrestrially adapted mammals. 

The end-Cretaceous extinction triggered the collapse of ecosystems and a drastic turnover of mammalian communities. During the Mesozoic, mammals were ecologically diverse, but less so than extant species. Modern ecological richness was established by the Eocene, but questions remain about the ecology of the first wave of mammals radiating after the extinction.Postcranial fossils are often used to determine locomotor behavior; however, the semicircular canals of theinner ear also represent a reliable proxy. These canals detect the angular acceleration of the head duringl ocomotion and transmit neuronal signals to the brain to allow stabilization of the eyes and head. Accordingly, vestibular sensitivity to rapid rotational head movements is higher in species with a larger canal radius of curvature and more orthogonal canals. We used high-resolution computed tomography scanning to obtain inner ear virtual endocasts for 30 specimens. We supplemented these with data from the literature to constructa database of 79 fossil from the Jurassic to the Eocene and 262 extant mammals. We compared data on canal morphology and another lifestyle proxy, the size of the petrosal lobules, which have a role in maintaining eyes’ movements and position. We find that Paleocene mammals exhibited a lower average and more constricted range of Agility Indices (AI), a new measure of canal radius size relative to body size, compared to Mesozoic, Eocene and extant taxa. Inthe early Paleocene, body mass and canal radius increased, but the former outpaced the latter leading to an AIdecline. Similarly, their petrosal lobules were relatively smaller on average compared to other temporal groups, which suggests less ability for fast movements. Additionally, Paleocene mammals had similar AIs to extant scansorial and terrestrial quadrupeds. In contrast, the lack of canal orthogonality change from the Mesozoic to the Paleocene indicates no trend toward lower vestibular sensitivity regardless of changes in body size. This result may reflect functional differences between canal orthogonality and radius size. Our results support previous work on tarsal morphology and locomotor behavior ancestral state reconstruction suggesting that ground dwelling mammals were more common than arboreal taxa during the Paleocene. Ultimately, this pattern may indicate that the collapse of forested environments immediately after extinction led to the preferential survivorship of more terrestrially adapted mammals. 

ABSTRACT Stony coral tissue loss disease (SCTLD) is decimating Caribbean corals. Here, through the metatranscriptomic assembly and annotation of two alphaflexivirus-like strains, we provide genomic evidence of filamentous viruses in SCTLD-affected, -exposed, and -unexposed coral colonies. These data will assist in clarifying the roles of viruses in SCTLD. 

Community colleges play a vital role in preparing the highly skilled technical workforce needed to support the biotechnology industry. Community colleges offer students hands-on practical experience, certificates, and technical degrees. Students include high-school graduates, individuals changing careers, college graduates, and even PhD holders. As these colleges support the many facets of the biotechnology industry, their laboratories are equipped to teach modern techniques, including DNA sequencing, mass spectrometry, microscopy, chromatography, immunoassays, and bioinformatics. Many programs are also developing education skill standards and curriculum to support the latest biotechnology manufacturing that includes CRISPR-based gene therapies, CAR-T, immuno-therapeutics, and patient derived tissues. Some programs have established contract service organizations and business incubators to catalyze regional economic development and provide internships for students entering the workforce. These college-run organizations share many similarities with ABRF core facilities. Over the last 20+ years, community college biotechnology programs have come together to share experiences and learning through the Bio-Link network. Bio-Link was funded by the NSF-ATE (National Science Foundation Advanced Technological Education) program until the fall of 2018. In the fall of 2019, InnovATEBIO, a new national center for biotechnology education, was initiated through a five-year NSF-ATE award. InnovATEBIO will build on the Bio-Link foundation to further advance connections between high schools, community colleges, and the biotechnology industry to increase the number of highly trained biotechnology technicians in the United States. InnovATEBIO will support activities designed to increase authentic research and work-based experiences and seeks to develop collaborations with ABRF members supporting course development and partner on projects that could be funded by NSF or others. 

The Atlantic meridional overturning circulation (AMOC) is pivotal for regional and global climate due to its key role in the uptake and redistribution of heat and carbon. Establishing the causes of historical variability in AMOC strength on different timescales can tell us how the circulation may respond to natural and anthropogenic changes at the ocean surface. However, understanding observed AMOC variability is challenging because the circulation is influenced by multiple factors that co-vary and whose overlapping impacts persist for years. Here we reconstruct and unambiguously attribute intermonthly and interannual AMOC variability at two observational arrays to the recent history of surface wind stress, temperature and salinity. We use a state-of-the-art technique that computes space- and time-varying sensitivity patterns of the AMOC strength with respect to multiple surface properties from a numerical ocean circulation model constrained by observations. While, on interannual timescales, AMOC variability at 26° N is overwhelmingly dominated by a linear response to local wind stress, overturning variability at subpolar latitudes is generated by the combined effects of wind stress and surface buoyancy anomalies. Our analysis provides a quantitative attribution of subpolar AMOC variability to temperature, salinity and wind anomalies at the ocean surface.